HL_9R3A_040

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_040 not in the Motif Atlas

Geometric match to HL_8B0X_037

Geometric discrepancy: 0.0897

The information below is about HL_8B0X_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50765.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9R3A|1|a|U|158
9R3A|1|a|G|159
9R3A|1|a|A|160
9R3A|1|a|A|161
9R3A|1|a|U|162
9R3A|1|a|C|163
9R3A|1|a|C|164
9R3A|1|a|A|165
9R3A|1|a|U|166
9R3A|1|a|A|167
9R3A|1|a|G|168

Current chains

Chain a

23S rRNA

Nearby chains

Chain w

Large ribosomal subunit protein bL28