HL_9R3A_089

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

9R3A|1|a|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_089 not in the Motif Atlas

Homologous match to HL_7A0S_058

Geometric discrepancy: 0.1943

The information below is about HL_7A0S_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

9R3A|1|a|U|2404
9R3A|1|a|G|2405
9R3A|1|a|A|2406
9R3A|1|a|A|2407
9R3A|1|a|U|2408
9R3A|1|a|G|2409
9R3A|1|a|G|2410
9R3A|1|a|A|2411
9R3A|1|a|A|2412
9R3A|1|a|G|2413

Current chains

Chain a

23S rRNA

Nearby chains

Chain k

Large ribosomal subunit protein uL15