HL_9R3A_091

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUGAAGUAGG

Length

10 nucleotides

Bulged bases

9R3A|1|a|G|2529, 9R3A|1|a|G|2535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9R3A_091 not in the Motif Atlas

Geometric match to HL_9E6Q_066

Geometric discrepancy: 0.3329

The information below is about HL_9E6Q_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

12

Unit IDs

9R3A|1|a|C|2527
9R3A|1|a|U|2528
9R3A|1|a|G|2529
9R3A|1|a|A|2530
9R3A|1|a|A|2531
9R3A|1|a|G|2532
9R3A|1|a|U|2533
9R3A|1|a|A|2534
9R3A|1|a|G|2535
9R3A|1|a|G|2536

Current chains

Chain a

23S rRNA

Nearby chains

Chain 3

Large ribosomal subunit protein bL36A

Chain g

Large ribosomal subunit protein uL6