HL_9R9P_083
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9R9P|1|C2|U|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9R9P_083 not in the Motif Atlas
- Homologous match to HL_9H3G_095
- Geometric discrepancy: 0.1252
- The information below is about HL_9H3G_095
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9R9P|1|C2|G|997
9R9P|1|C2|A|998
9R9P|1|C2|U|999
9R9P|1|C2|C|1000
9R9P|1|C2|A|1001
9R9P|1|C2|G|1002
9R9P|1|C2|A|1003
9R9P|1|C2|U|1004
9R9P|1|C2|A|1005
9R9P|1|C2|C|1006
9R9P|1|C2|C|1007
Current chains
- Chain C2
- RNA (1642-MER)
Nearby chains
- Chain 5
- mRNA_Flag-Pgk-1-70
- Chain 6
- Transfer RNA; tRNA
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain SO
- 40S ribosomal protein S14-A
- Chain Sa
- Small ribosomal subunit protein eS26A
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