HL_9RHU_015
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UG(PSU)UCAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9RHU|1|A1|G|822
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RHU_015 not in the Motif Atlas
- Homologous match to HL_9PN5_092
- Geometric discrepancy: 0.0744
- The information below is about HL_9PN5_092
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.5
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
9RHU|1|A1|U|821
9RHU|1|A1|G|822
9RHU|1|A1|PSU|823
9RHU|1|A1|U|824
9RHU|1|A1|C|825
9RHU|1|A1|A|826
9RHU|1|A1|A|827
9RHU|1|A1|A|828
9RHU|1|A1|G|829
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain P1
- 40S ribosomal protein S4
- Chain U1
- Small ribosomal subunit protein uS4
- Chain j1
- 40S ribosomal protein S24
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