HL_9RHU_018

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AGGUGAAAU(PSU)

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|A|958
9RHU|1|A1|G|959
9RHU|1|A1|G|960
9RHU|1|A1|U|961
9RHU|1|A1|G|962
9RHU|1|A1|A|963
9RHU|1|A1|A|964
9RHU|1|A1|A|965
9RHU|1|A1|U|966
9RHU|1|A1|PSU|967

Current chains

Chain A1

18S rRNA

Nearby chains

Chain I1

mRNA containing F2A sequence

Chain J1

Transfer RNA; tRNA

Chain M1

40S ribosomal protein S3a

Chain Q1

Small ribosomal subunit protein uS7

Chain Z1

Small ribosomal subunit protein uS11