HL_9RHU_031
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AUUGCAAUUAU(PSU)
- Length
- 12 nucleotides
- Bulged bases
- 9RHU|1|A1|U|1622, 9RHU|1|A1|U|1623, 9RHU|1|A1|A|1624
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|A|1615
9RHU|1|A1|U|1616
9RHU|1|A1|U|1617
9RHU|1|A1|G|1618
9RHU|1|A1|C|1619
9RHU|1|A1|A|1620
9RHU|1|A1|A|1621
9RHU|1|A1|U|1622
9RHU|1|A1|U|1623
9RHU|1|A1|A|1624
9RHU|1|A1|U|1625
9RHU|1|A1|PSU|1626
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain H1
- Small ribosomal subunit protein uS14
- Chain a1
- Small ribosomal subunit protein uS19
- Chain d1
- Small ribosomal subunit protein uS13
- Chain e1
- 40S ribosomal protein eS19
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