HL_9RHU_075

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GUUCGCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RHU_075 not in the Motif Atlas

Homologous match to HL_8GLP_042

Geometric discrepancy: 0.0541

The information below is about HL_8GLP_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52776.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

3

Unit IDs

9RHU|1|A3|G|2507
9RHU|1|A3|U|2508
9RHU|1|A3|U|2509
9RHU|1|A3|C|2510
9RHU|1|A3|G|2511
9RHU|1|A3|C|2512
9RHU|1|A3|C|2513

Current chains

Chain A3

28S rRNA

Nearby chains

Chain N2

Ribosomal protein L19

Chain k2

60S ribosomal protein L37a