HL_9RHU_095

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

U(PSU)UGGGUUU(PSU)A

Length

11 nucleotides

Bulged bases

9RHU|1|A3|U|4100

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|U|4098
9RHU|1|A3|PSU|4099
9RHU|1|A3|U|4100
9RHU|1|A3|G|4101
9RHU|1|A3|G|4102
9RHU|1|A3|G|4103
9RHU|1|A3|U|4104
9RHU|1|A3|U|4105
9RHU|1|A3|U|4106
9RHU|1|A3|PSU|4107
9RHU|1|A3|A|4108

Current chains

Chain A3

28S rRNA

Nearby chains

Chain H2

Large ribosomal subunit protein eL13

Chain W2

60S ribosomal protein L27a

Chain e2

Large ribosomal subunit protein eL36

Chain j2

Ribosomal protein L36a