HL_9RTU_047
3D structure
- PDB id
- 9RTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CG(PSU)AAC(3TD)A(PSU)AACG
- Length
- 13 nucleotides
- Bulged bases
- 9RTU|1|A|A|1913
- QA status
- Modified nucleotides: PSU, 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RTU_047 not in the Motif Atlas
- Geometric match to HL_8P9A_160
- Geometric discrepancy: 0.3071
- The information below is about HL_8P9A_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70658.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9RTU|1|A|C|1909
9RTU|1|A|G|1910
9RTU|1|A|PSU|1911
9RTU|1|A|A|1912
9RTU|1|A|A|1913
9RTU|1|A|C|1914
9RTU|1|A|3TD|1915
9RTU|1|A|A|1916
9RTU|1|A|PSU|1917
9RTU|1|A|A|1918
9RTU|1|A|A|1919
9RTU|1|A|C|1920
9RTU|1|A|G|1921
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain w
- Transfer RNA; tRNA
- Chain z
- mRNA
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