HL_9RVC_086
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 9RVC|1|a|A|1940
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RVC_086 not in the Motif Atlas
- Geometric match to HL_9H3G_052
- Geometric discrepancy: 0.1076
- The information below is about HL_9H3G_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.3
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9RVC|1|a|G|1937
9RVC|1|a|U|1938
9RVC|1|a|A|1939
9RVC|1|a|A|1940
9RVC|1|a|C|1941
9RVC|1|a|U|1942
9RVC|1|a|A|1943
9RVC|1|a|U|1944
9RVC|1|a|A|1945
9RVC|1|a|A|1946
9RVC|1|a|C|1947
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain X
- spa mRNA
- Chain Y
- Transfer RNA; tRNA
- Chain Z
- Transfer RNA; tRNA
Coloring options: