HL_9RVC_092
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9RVC|1|a|A|2295, 9RVC|1|a|C|2302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RVC_092 not in the Motif Atlas
- Homologous match to HL_7A0S_053
- Geometric discrepancy: 0.1342
- The information below is about HL_7A0S_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.3
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9RVC|1|a|C|2291
9RVC|1|a|U|2292
9RVC|1|a|A|2293
9RVC|1|a|A|2294
9RVC|1|a|A|2295
9RVC|1|a|A|2296
9RVC|1|a|G|2297
9RVC|1|a|G|2298
9RVC|1|a|U|2299
9RVC|1|a|A|2300
9RVC|1|a|A|2301
9RVC|1|a|C|2302
9RVC|1|a|G|2303
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain l
- Large ribosomal subunit protein uL16
- Chain v
- Large ribosomal subunit protein bL27
Coloring options: