HL_9SUM_047

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

9SUM|1|A|G|2518

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.5

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

21

Unit IDs

9SUM|1|A|C|2516
9SUM|1|A|U|2517
9SUM|1|A|G|2518
9SUM|1|A|G|2519
9SUM|1|A|G|2520
9SUM|1|A|G|2521
9SUM|1|A|C|2522
9SUM|1|A|G|2523
9SUM|1|A|G|2524

Current chains

Chain A

25S rRNA

Nearby chains

Chain L

60S ribosomal protein L10

Chain d

60S ribosomal protein L29