HL_9SUM_089
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9SUM|1|CA|U|974
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9SUM|1|CA|G|967
9SUM|1|CA|A|968
9SUM|1|CA|U|969
9SUM|1|CA|C|970
9SUM|1|CA|A|971
9SUM|1|CA|G|972
9SUM|1|CA|A|973
9SUM|1|CA|U|974
9SUM|1|CA|A|975
9SUM|1|CA|C|976
9SUM|1|CA|C|977
Current chains
- Chain CA
- 18S rRNA
Nearby chains
- Chain 1
- Transfer RNA; tRNA
- Chain 2
- RNA (5'-R(P*CP*GP*A)-3')
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain ZF
- Small ribosomal subunit protein uS11
- Chain ZS
- 40S ribosomal protein S26
Coloring options: