HL_9SUM_092

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GACCCAACAC

Length

10 nucleotides

Bulged bases

9SUM|1|CA|A|1166

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97521.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

9SUM|1|CA|G|1158
9SUM|1|CA|A|1159
9SUM|1|CA|C|1160
9SUM|1|CA|C|1161
9SUM|1|CA|C|1162
9SUM|1|CA|A|1163
9SUM|1|CA|A|1164
9SUM|1|CA|C|1165
9SUM|1|CA|A|1166
9SUM|1|CA|C|1167

Current chains

Chain CA

18S rRNA

Nearby chains

Chain 1

Transfer RNA; tRNA

Chain ZH

Small ribosomal subunit protein uS9

Chain ZL

Small ribosomal subunit protein uS10

Chain ZV

Small ribosomal subunit protein uS14