HL_9SYR_016

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|1436
9SYR|1|L1|C|1437
9SYR|1|L1|U|1438
9SYR|1|L1|C|1439
9SYR|1|L1|U|1440
9SYR|1|L1|C|1441
9SYR|1|L1|C|1442
9SYR|1|L1|A|1443
9SYR|1|L1|G|1444
9SYR|1|L1|U|1445
9SYR|1|L1|C|1446
9SYR|1|L1|C|1447
9SYR|1|L1|G|1448

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LI

Large ribosomal subunit protein uL30

Chain Lc

60S ribosomal protein L4

Chain Lh

60S ribosomal protein L18

Chain Ls

60S ribosomal protein L29