HL_9SYR_037

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CGCAGCAG

Length

8 nucleotides

Bulged bases

9SYR|1|L1|C|2794, 9SYR|1|L1|G|2796, 9SYR|1|L1|A|2798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|2792
9SYR|1|L1|G|2793
9SYR|1|L1|C|2794
9SYR|1|L1|A|2795
9SYR|1|L1|G|2796
9SYR|1|L1|C|2797
9SYR|1|L1|A|2798
9SYR|1|L1|G|2799

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LA

Large ribosomal subunit protein eL37

Chain LC

60S ribosomal protein L39

Chain LN

Green fluorescent protein,Small ubiquitin-related modifier 1,Green fluorescent protein,Small ubiquitin-related modifier 1,Histone H4,X-box-binding protein 1,X-box-binding protein 1

Chain Lc

60S ribosomal protein L4

Chain Lg

60S ribosomal protein L17