HL_9SYR_047

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

9SYR|1|L1|G|4195

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|4193
9SYR|1|L1|U|4194
9SYR|1|L1|G|4195
9SYR|1|L1|OMG|4196
9SYR|1|L1|G|4197
9SYR|1|L1|G|4198
9SYR|1|L1|C|4199
9SYR|1|L1|G|4200
9SYR|1|L1|G|4201

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L10

Chain Ls

60S ribosomal protein L29

Chain S3

Transfer RNA; tRNA