HL_9SYR_053

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

U(PSU)UGGGUUU(PSU)A

Length

11 nucleotides

Bulged bases

9SYR|1|L1|U|4354

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|U|4352
9SYR|1|L1|PSU|4353
9SYR|1|L1|U|4354
9SYR|1|L1|G|4355
9SYR|1|L1|G|4356
9SYR|1|L1|G|4357
9SYR|1|L1|U|4358
9SYR|1|L1|U|4359
9SYR|1|L1|U|4360
9SYR|1|L1|PSU|4361
9SYR|1|L1|A|4362

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L36a

Chain LP

Large ribosomal subunit protein eL13

Chain Lr

60S ribosomal protein L27a

Chain Lz

60S ribosomal protein L36