HL_9SYR_076

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9SYR|1|S1|A|448, 9SYR|1|S1|C|450, 9SYR|1|S1|G|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|C|441
9SYR|1|S1|C|442
9SYR|1|S1|U|443
9SYR|1|S1|G|444
9SYR|1|S1|A|445
9SYR|1|S1|G|446
9SYR|1|S1|A|447
9SYR|1|S1|A|448
9SYR|1|S1|A|449
9SYR|1|S1|C|450
9SYR|1|S1|G|451
9SYR|1|S1|G|452

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SA

40S ribosomal protein S8

Chain Sh

Isoform 3 of Small ribosomal subunit protein eS24

Chain Sw

Small ribosomal subunit protein eS4, X isoform

Chain Sy

40S ribosomal protein S6