HL_9SYR_085

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

AGGUGAAAU(PSU)

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|A|957
9SYR|1|S1|G|958
9SYR|1|S1|G|959
9SYR|1|S1|U|960
9SYR|1|S1|G|961
9SYR|1|S1|A|962
9SYR|1|S1|A|963
9SYR|1|S1|A|964
9SYR|1|S1|U|965
9SYR|1|S1|PSU|966

Current chains

Chain S1

18S rRNA

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain S2

mRNA

Chain SC

40S ribosomal protein S5

Chain SG

40S ribosomal protein S14

Chain Su

40S ribosomal protein S3a