HL_9SYR_091

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GAC(B8N)CAACAC

Length

10 nucleotides

Bulged bases

9SYR|1|S1|A|1253

QA status

Modified nucleotides: B8N

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|G|1245
9SYR|1|S1|A|1246
9SYR|1|S1|C|1247
9SYR|1|S1|B8N|1248
9SYR|1|S1|C|1249
9SYR|1|S1|A|1250
9SYR|1|S1|A|1251
9SYR|1|S1|C|1252
9SYR|1|S1|A|1253
9SYR|1|S1|C|1254

Current chains

Chain S1

18S rRNA

Nearby chains

Chain S3

Transfer RNA; tRNA

Chain Sc

40S ribosomal protein S16

Chain Sl

40S ribosomal protein S20

Chain Sp

40S ribosomal protein S29

Chain Sr

Ubiquitin