HL_9SYR_102
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GUCUCAUAAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9SYR_102 not in the Motif Atlas
- Homologous match to HL_5IB8_208
- Geometric discrepancy: 0.2896
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9SYR|1|S3|G|30
9SYR|1|S3|U|31
9SYR|1|S3|C|32
9SYR|1|S3|U|33
9SYR|1|S3|C|34
9SYR|1|S3|A|35
9SYR|1|S3|U|36
9SYR|1|S3|A|37
9SYR|1|S3|A|38
9SYR|1|S3|U|39
9SYR|1|S3|C|40
Current chains
- Chain S3
- tRNA
Nearby chains
- Chain S1
- Small subunit ribosomal RNA; SSU rRNA
- Chain S2
- mRNA
- Chain Sa
- 40S ribosomal protein S15
- Chain Sc
- 40S ribosomal protein S16
- Chain Sm
- 40S ribosomal protein S25
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