HL_9T5X_011

3D structure

PDB id

9T5X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9T5X|1|A|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9T5X_011 not in the Motif Atlas

Geometric match to HL_4V9F_032

Geometric discrepancy: 0.2892

The information below is about HL_4V9F_032

Detailed Annotation

Anticodon loop related

Broad Annotation

Anticodon loop related

Motif group

HL_87306.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

9T5X|1|A|G|462
9T5X|1|A|U|463
9T5X|1|A|U|464
9T5X|1|A|A|465
9T5X|1|A|A|466
9T5X|1|A|U|467
9T5X|1|A|A|468
9T5X|1|A|C|469
9T5X|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains