HL_9TI7_077

3D structure

PDB id

9TI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

UCUUG

Length

5 nucleotides

Bulged bases

9TI7|1|a|C|219, 9TI7|1|a|U|221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI7_077 not in the Motif Atlas

Geometric match to HL_6MSF_001

Geometric discrepancy: 0.2353

The information below is about HL_6MSF_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.5

Basepair signature

cWW-F

Number of instances in this motif group

42

Unit IDs

9TI7|1|a|U|218
9TI7|1|a|C|219
9TI7|1|a|U|220
9TI7|1|a|U|221
9TI7|1|a|G|222

Current chains

Chain a

16S rRNA

Nearby chains