HL_9TKR_104
3D structure
- PDB id
- 9TKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S elongation competent complex (70S EC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TKR_104 not in the Motif Atlas
- Homologous match to HL_6CFJ_107
- Geometric discrepancy: 0.1273
- The information below is about HL_6CFJ_107
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 45
Unit IDs
9TKR|1|D5|G|31
9TKR|1|D5|C|32
9TKR|1|D5|U|33
9TKR|1|D5|C|34
9TKR|1|D5|A|35
9TKR|1|D5|U|36
9TKR|1|D5|A|37
9TKR|1|D5|A|38
9TKR|1|D5|C|39
Current chains
- Chain D5
- tRNAfMet
Nearby chains
- Chain AH
- Small ribosomal subunit protein uS9
- Chain D1
- Small subunit ribosomal RNA; SSU rRNA
- Chain D4
- mRNA
Coloring options: