HL_9TZ5_057
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- UUUAUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9TZ5|1|a|U|2422
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TZ5_057 not in the Motif Atlas
- Homologous match to HL_7A0S_058
- Geometric discrepancy: 0.1749
- The information below is about HL_7A0S_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51853.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9TZ5|1|a|U|2420
9TZ5|1|a|U|2421
9TZ5|1|a|U|2422
9TZ5|1|a|A|2423
9TZ5|1|a|U|2424
9TZ5|1|a|G|2425
9TZ5|1|a|G|2426
9TZ5|1|a|A|2427
9TZ5|1|a|A|2428
9TZ5|1|a|G|2429
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain k
- Large ribosomal subunit protein uL15
Coloring options: