HL_9UZM_009

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9UZM|1|2|A|438, 9UZM|1|2|C|440, 9UZM|1|2|G|441

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|C|431
9UZM|1|2|C|432
9UZM|1|2|U|433
9UZM|1|2|G|434
9UZM|1|2|A|435
9UZM|1|2|G|436
9UZM|1|2|A|437
9UZM|1|2|A|438
9UZM|1|2|A|439
9UZM|1|2|C|440
9UZM|1|2|G|441
9UZM|1|2|G|442

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

Small ribosomal subunit protein eS4

Chain I

Small ribosomal subunit protein eS6

Chain K

Small ribosomal subunit protein eS8

Chain a

40S ribosomal protein S24