HL_9UZM_031

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AUUGCAAUUAUU

Length

12 nucleotides

Bulged bases

9UZM|1|2|U|1616, 9UZM|1|2|U|1617, 9UZM|1|2|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|A|1609
9UZM|1|2|U|1610
9UZM|1|2|U|1611
9UZM|1|2|G|1612
9UZM|1|2|C|1613
9UZM|1|2|A|1614
9UZM|1|2|A|1615
9UZM|1|2|U|1616
9UZM|1|2|U|1617
9UZM|1|2|A|1618
9UZM|1|2|U|1619
9UZM|1|2|U|1620

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain R

Small ribosomal subunit protein uS19

Chain U

Small ribosomal subunit protein uS13

Chain e

Small ribosomal subunit protein uS14