HL_9VXN_095
3D structure
- PDB id
- 9VXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- GA(PSU)CAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9VXN|1|S2|U|1061
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXN|1|S2|G|1054
9VXN|1|S2|A|1055
9VXN|1|S2|PSU|1056
9VXN|1|S2|C|1057
9VXN|1|S2|A|1058
9VXN|1|S2|G|1059
9VXN|1|S2|A|1060
9VXN|1|S2|U|1061
9VXN|1|S2|A|1062
9VXN|1|S2|C|1063
9VXN|1|S2|C|1064
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain SO
- Small ribosomal subunit protein uS11
- Chain Sa
- Small ribosomal subunit protein eS26
- Chain v
- Transfer RNA; tRNA
- Chain w
- mRNA
Coloring options: