HL_9W0N_049
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9W0N|1|1|A|2030, 9W0N|1|1|A|2031, 9W0N|1|1|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_049 not in the Motif Atlas
- Homologous match to HL_8B0X_078
- Geometric discrepancy: 0.1356
- The information below is about HL_8B0X_078
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9W0N|1|1|G|2027
9W0N|1|1|U|2028
9W0N|1|1|G|2029
9W0N|1|1|A|2030
9W0N|1|1|A|2031
9W0N|1|1|G|2032
9W0N|1|1|A|2033
9W0N|1|1|U|2034
9W0N|1|1|G|2035
9W0N|1|1|C|2036
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain B
- Large ribosomal subunit protein bL32
- Chain c
- Large ribosomal subunit protein uL3
Coloring options: