HL_9W0N_052
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9W0N|1|1|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_052 not in the Motif Atlas
- Homologous match to HL_7A0S_052
- Geometric discrepancy: 0.196
- The information below is about HL_7A0S_052
- Detailed Annotation
- LSU P loop
- Broad Annotation
- LSU P loop
- Motif group
- HL_11974.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
9W0N|1|1|C|2248
9W0N|1|1|U|2249
9W0N|1|1|G|2250
9W0N|1|1|G|2251
9W0N|1|1|G|2252
9W0N|1|1|G|2253
9W0N|1|1|C|2254
9W0N|1|1|G|2255
9W0N|1|1|G|2256
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain m
- Large ribosomal subunit protein uL16
- Chain w
- Large ribosomal subunit protein bL27
Coloring options: