HL_9W0N_065
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9W0N|1|1|G|2751, 9W0N|1|1|C|2755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_065 not in the Motif Atlas
- Homologous match to HL_8B0X_093
- Geometric discrepancy: 0.09
- The information below is about HL_8B0X_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.4
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 12
Unit IDs
9W0N|1|1|C|2745
9W0N|1|1|U|2746
9W0N|1|1|G|2747
9W0N|1|1|A|2748
9W0N|1|1|A|2749
9W0N|1|1|A|2750
9W0N|1|1|G|2751
9W0N|1|1|C|2752
9W0N|1|1|A|2753
9W0N|1|1|U|2754
9W0N|1|1|C|2755
9W0N|1|1|U|2756
9W0N|1|1|A|2757
9W0N|1|1|A|2758
9W0N|1|1|G|2759
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain F
- Large ribosomal subunit protein bL36A
- Chain f
- Large ribosomal subunit protein uL6
- Chain j
- Large ribosomal subunit protein uL13
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