HL_9W0N_070
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 9W0N|1|2|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_070 not in the Motif Atlas
- Homologous match to HL_9H3G_074
- Geometric discrepancy: 0.1849
- The information below is about HL_9H3G_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9W0N|1|2|C|38
9W0N|1|2|A|39
9W0N|1|2|U|40
9W0N|1|2|G|41
9W0N|1|2|C|42
9W0N|1|2|C|43
9W0N|1|2|G|44
Current chains
- Chain 2
- 5S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain A
- Large ribosomal subunit protein bL31
- Chain e
- Large ribosomal subunit protein uL5
- Chain o
- Large ribosomal subunit protein uL18
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