HL_9W0N_088
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9W0N|1|3|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_088 not in the Motif Atlas
- Homologous match to HL_8B0X_016
- Geometric discrepancy: 0.1241
- The information below is about HL_8B0X_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9W0N|1|3|G|786
9W0N|1|3|A|787
9W0N|1|3|U|788
9W0N|1|3|U|789
9W0N|1|3|A|790
9W0N|1|3|G|791
9W0N|1|3|A|792
9W0N|1|3|U|793
9W0N|1|3|A|794
9W0N|1|3|C|795
9W0N|1|3|C|796
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain 6
- Transfer RNA; tRNA
- Chain P
- Small ribosomal subunit protein uS11
- Chain Z
- Small ribosomal subunit protein bS21
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