HL_9WNQ_096
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9WNQ|1|b|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNQ_096 not in the Motif Atlas
- Homologous match to HL_7A0S_052
- Geometric discrepancy: 0.1704
- The information below is about HL_7A0S_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
9WNQ|1|b|C|2248
9WNQ|1|b|U|2249
9WNQ|1|b|G|2250
9WNQ|1|b|G|2251
9WNQ|1|b|G|2252
9WNQ|1|b|G|2253
9WNQ|1|b|C|2254
9WNQ|1|b|G|2255
9WNQ|1|b|G|2256
Current chains
- Chain b
- 23S ribosomal RNA
Nearby chains
- Chain Y
- Transfer RNA; tRNA
- Chain n
- 50S ribosomal protein L16
- Chain y
- Large ribosomal subunit protein bL27
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