HL_9WW4_071
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- AUCUCGUCUGAUCU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WW4_071 not in the Motif Atlas
- Geometric match to HL_8QYX_071
- Geometric discrepancy: 0.0546
- The information below is about HL_8QYX_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01182.3
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
9WW4|1|AB|A|32
9WW4|1|AB|U|33
9WW4|1|AB|C|34
9WW4|1|AB|U|35
9WW4|1|AB|C|36
9WW4|1|AB|G|37
9WW4|1|AB|U|38
9WW4|1|AB|C|39
9WW4|1|AB|U|40
9WW4|1|AB|G|41
9WW4|1|AB|A|42
9WW4|1|AB|U|43
9WW4|1|AB|C|44
9WW4|1|AB|U|45
Current chains
- Chain AB
- 5S rRNA (120-MER)
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain AG
- Large ribosomal subunit protein uL18
- Chain AM
- 60S ribosomal protein L11
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