HL_9WW4_097
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GA(PSU)CAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9WW4|1|BA|U|1061
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WW4_097 not in the Motif Atlas
- Homologous match to HL_9H3G_095
- Geometric discrepancy: 0.0925
- The information below is about HL_9H3G_095
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9WW4|1|BA|G|1054
9WW4|1|BA|A|1055
9WW4|1|BA|PSU|1056
9WW4|1|BA|C|1057
9WW4|1|BA|A|1058
9WW4|1|BA|G|1059
9WW4|1|BA|A|1060
9WW4|1|BA|U|1061
9WW4|1|BA|A|1062
9WW4|1|BA|C|1063
9WW4|1|BA|C|1064
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- 40S ribosomal protein S5
- Chain BR
- 40S ribosomal protein S26
- Chain Ba
- Small ribosomal subunit protein uS11
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