HL_9WW5_058
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- UUCAG(OMU)ACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WW5_058 not in the Motif Atlas
- Homologous match to HL_8GLP_063
- Geometric discrepancy: 0.0578
- The information below is about HL_8GLP_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_15296.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9WW5|1|AA|U|4301
9WW5|1|AA|U|4302
9WW5|1|AA|C|4303
9WW5|1|AA|A|4304
9WW5|1|AA|G|4305
9WW5|1|AA|OMU|4306
9WW5|1|AA|A|4307
9WW5|1|AA|C|4308
9WW5|1|AA|G|4309
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AS
- 60S ribosomal protein L18
- Chain AV
- 60S ribosomal protein L21
- Chain Ac
- Large ribosomal subunit protein uL15
- Chain Aq
- 60S ribosomal protein L36a
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