HL_9XTC_024

3D structure

PDB id

9XTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class C, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9XTC|1|A|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9XTC_024 not in the Motif Atlas

Geometric match to HL_5D5L_003

Geometric discrepancy: 0.0767

The information below is about HL_5D5L_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9XTC|1|A|C|1449
9XTC|1|A|U|1450
9XTC|1|A|U|1451
9XTC|1|A|C|1452
9XTC|1|A|G|1453
9XTC|1|A|G|1454

Current chains

Chain A

RNA (1176-MER)

Nearby chains