HL_9Y49_105

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

9Y49|1|B2|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|G|1054
9Y49|1|B2|A|1055
9Y49|1|B2|U|1056
9Y49|1|B2|C|1057
9Y49|1|B2|A|1058
9Y49|1|B2|G|1059
9Y49|1|B2|A|1060
9Y49|1|B2|U|1061
9Y49|1|B2|A|1062
9Y49|1|B2|C|1063
9Y49|1|B2|C|1064

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain AO

40S ribosomal protein S14

Chain Aa

40S ribosomal protein S26

Chain tR

Transfer RNA; tRNA