HL_9ZTL_039

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

9ZTL|1|a|A|196, 9ZTL|1|a|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_039 not in the Motif Atlas

Homologous match to HL_7A0S_006

Geometric discrepancy: 0.1195

The information below is about HL_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

24

Unit IDs

9ZTL|1|a|G|194
9ZTL|1|a|A|195
9ZTL|1|a|A|196
9ZTL|1|a|A|197
9ZTL|1|a|C|198
9ZTL|1|a|A|199
9ZTL|1|a|U|200
9ZTL|1|a|C|201

Current chains

Chain a

23s rRNA

Nearby chains

Chain k

50S ribosomal protein L15

Chain w

50S ribosomal protein L28