IL_11DG_076

3D structure

PDB id

11DG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved Vibrio cholerae 16S rRNA (VC-S4.4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

11DG|1|a|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11DG|1|a|A|844
11DG|1|a|A|845
11DG|1|a|U|846
11DG|1|a|U|847
11DG|1|a|C|848
*
11DG|1|a|G|930
11DG|1|a|U|931
11DG|1|a|U|932
11DG|1|a|A|933
11DG|1|a|U|934

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain y

50S ribosomal protein L30