IL_11EL_070
3D structure
- PDB id
- 11EL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 11EL|1|a|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11EL_070 not in the Motif Atlas
- Homologous match to IL_7A0S_004
- Geometric discrepancy: 0.4474
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
11EL|1|a|G|81
11EL|1|a|U|82
11EL|1|a|A|83
11EL|1|a|A|84
11EL|1|a|G|85
*
11EL|1|a|C|97
11EL|1|a|G|98
11EL|1|a|U|99
11EL|1|a|U|100
11EL|1|a|A|101
11EL|1|a|U|102
11EL|1|a|A|103
11EL|1|a|A|104
11EL|1|a|C|105
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain t
- 50S ribosomal protein L24
- Chain x
- Large ribosomal subunit protein uL29
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