IL_11FV_033
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAG*CGUAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 11FV|1|C|A|696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11FV_033 not in the Motif Atlas
- Geometric match to IL_8B0X_034
- Geometric discrepancy: 0.1059
- The information below is about IL_8B0X_034
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
11FV|1|C|U|678
11FV|1|C|G|679
11FV|1|C|U|680
11FV|1|C|A|681
11FV|1|C|G|682
*
11FV|1|C|C|693
11FV|1|C|G|694
11FV|1|C|U|695
11FV|1|C|A|696
11FV|1|C|G|697
11FV|1|C|A|698
11FV|1|C|U|699
11FV|1|C|A|700
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain r
- 30S ribosomal protein S11
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