IL_8B0X_034

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

8B0X|1|A|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54465.1

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

7

Unit IDs

8B0X|1|A|U|684
8B0X|1|A|G|685
8B0X|1|A|U|686
8B0X|1|A|A|687
8B0X|1|A|G|688
*
8B0X|1|A|C|699
8B0X|1|A|G|700
8B0X|1|A|U|701
8B0X|1|A|A|702
8B0X|1|A|G|703
8B0X|1|A|A|704
8B0X|1|A|G|705
8B0X|1|A|A|706

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11

Chain a

Large subunit ribosomal RNA; LSU rRNA