IL_11FV_061
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGAAG*CCACG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11FV_061 not in the Motif Atlas
- Geometric match to IL_8B0X_062
- Geometric discrepancy: 0.0806
- The information below is about IL_8B0X_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.3
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
11FV|1|C|C|1424
11FV|1|C|A|1425
11FV|1|C|G|1426
11FV|1|C|A|1427
11FV|1|C|A|1428
11FV|1|C|G|1429
*
11FV|1|C|C|1460
11FV|1|C|C|1461
11FV|1|C|A|1462
11FV|1|C|C|1463
11FV|1|C|G|1464
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain 2
- Small ribosomal subunit protein bS20
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain S
- Large ribosomal subunit protein uL14
- Chain X
- Large ribosomal subunit protein bL19
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