IL_11GG_023
3D structure
- PDB id
- 11GG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- CGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11GG_023 not in the Motif Atlas
- Homologous match to IL_6CZR_135
- Geometric discrepancy: 0.1507
- The information below is about IL_6CZR_135
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
11GG|1|C|C|574
11GG|1|C|G|575
11GG|1|C|U|576
11GG|1|C|A|577
11GG|1|C|G|578
*
11GG|1|C|U|751
11GG|1|C|G|752
11GG|1|C|A|753
11GG|1|C|G|754
11GG|1|C|G|755
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain o
- Small ribosomal subunit protein uS8
- Chain t
- 30S ribosomal protein S12
- Chain w
- Small ribosomal subunit protein uS15
- Chain y
- Small ribosomal subunit protein uS17
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