IL_11GG_092

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_11GG_092 not in the Motif Atlas

Geometric match to IL_8OI5_106

Geometric discrepancy: 0.2935

The information below is about IL_8OI5_106

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87767.3

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

18

Unit IDs

11GG|1|I|G|875
11GG|1|I|C|876
11GG|1|I|A|877
11GG|1|I|A|878
11GG|1|I|G|879
*
11GG|1|I|C|898
11GG|1|I|A|899
11GG|1|I|A|900
11GG|1|I|C|901
11GG|1|I|C|902

Current chains

Chain I

23S ribosomal RNA

Nearby chains