IL_11HV_098
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HV_098 not in the Motif Atlas
- Geometric match to IL_8GLP_305
- Geometric discrepancy: 0.0496
- The information below is about IL_8GLP_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.3
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
11HV|1|28|G|2847
11HV|1|28|G|2848
11HV|1|28|A|2849
11HV|1|28|A|2850
11HV|1|28|G|2851
11HV|1|28|U|2852
11HV|1|28|C|2853
11HV|1|28|G|2854
11HV|1|28|G|2855
*
11HV|1|28|C|3837
11HV|1|28|U|3838
11HV|1|28|G|3839
11HV|1|28|U|3840
11HV|1|28|C|3841
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 25
- Large ribosomal subunit protein uL14
- Chain L3
- 60S ribosomal protein L3
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